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Recent Publications

  1. Singh S, Hegde M, Kaur I, Adlakha N.Temporal proteome profiling of Botrytis cinerea reveals proteins involved in plant invasion and survival.Sci Rep. 2025 Apr 7;15(1):11857. doi: 10.1038/s41598-025-92683-5.PMID: 40195400.
  2. Joshi G, Verma G, Kaur S, Ramasamy E, Chauhan N, Singh S, Jana P, Rizvi ZA, Kshetrapal P, Bhatnagar S, Pandey AK, Awasthi A, Das B, Guchhait P. Severe SARS-CoV-2 infection in diabetes was rescued in mice supplemented with metformin and/or αKG, and patients taking metformin, via HIF1α-IFN axis.Clin Transl Med. 2025 Apr;15(4):e70275. doi: 10.1002/ctm2.70275.PMID: 40200582
  3. Gupta N, Bag I, Visweswaraiah J, Hinnebusch A, Thakur A.Distinct uS11/Rps14 interactions with the translation preinitiation complex differentially alter the accuracy of start codon recognition.Nucleic Acids Res. 2025 Mar 20;53(6):gkaf163. doi: 10.1093/nar/gkaf163.PMID: 40156863
  4. Asuru TR, Rajagopal RE, Rajendran A, Parveen G, Das A, Devi P, Dasgupta SK, Kalyanaraman S, Guchhait P, Thiagarajan P.Identification of cobra and viper bites in southern India using enzyme-linked immunosorbent assay.Lab Med. 2025 Mar 26:lmae119. doi: 10.1093/labmed/lmae119. Online ahead of print.PMID: 4013925
  5. Parveen S, Rath PP, Tabrez S, Khan S, Singh P, Arkam SZ, Verma S, Ahmad S, Singh SK, Junaid IT, Kumar D, Theisen M, Gupta D, Mohmmed A, Salunke DM, Singh AP, Malhotra P.Novel, fully human, anti-PfCSP antibodies with potent antimalarial activity using a phage display based strategy.Vaccine. 2025 Mar 17;54:126993. doi: 10.1016/j.vaccine.2025.126993. Online ahead of print.PMID: 40101454
  6. Mohapatra SS, Bisht KS, Suryawanshi S, Gupta S, Biswas VK, Chakraborty A, Raghav SK, Maiti TK, Kar RK, Biswas A.Decoding Anti-Amyloidogenic and Fibril Neutralizing Action of Gut Microbiota-Derived Indole 3-Acetic Acid on Insulin Fibrillation through Multispectroscopic, Machine Learning, and Hybrid Quantum Mechanics/Molecular Mechanics Approaches.J Phys Chem B. 2025 Mar 20. doi: 10.1021/acs.jpcb.4c07325. Online ahead of print.PMID: 40109067
  7. Pragasam AK, Maurya S, Jain K, Pal S, Raja C, Yadav R, Kumar S, Purohit A, Pradhan D, Kajal K, Talukdar D, Singh AN, Verma J, Jana P, Rawat S, Kshetrapal P, Krishna A, Kumar S, Bansal VK, Das B, Srikanth CV, Garg PK.Invasive Salmonella Typhimurium Colonizes Gallbladder and Contributes to Gallbladder Carcinogenesis through Activation of Host Epigenetic Modulator KDM6B.Cancer Lett. 2025 Mar 10:217621. doi: 10.1016/j.canlet.2025.217621. Online ahead of print.
    PMID: 40074067
  8. Singh A, Majee P, Mishra L, Prajapat SK, Sharma TK, Kalia M, Kumar A.Role of RNA G-Quadruplexes in the Japanese Encephalitis Virus Genome and Their Recognition as Prospective Antiviral Targets.ACS Infect Dis. 2025 Mar 14;11(3):558-572. doi: 10.1021/acsinfecdis.4c00507. Epub 2024 Oct 22.
    PMID: 39436355
  9. Bhatnagar K, Raju S, Patki N, Motiani RK, Chaudhary S.Targeting mineral metabolism in cancer: Insights into signaling pathways and therapeutic strategies.Semin Cancer Biol. 2025 Feb 28:S1044-579X(25)00039-2. doi: 10.1016/j.semcancer.2025.02.011. Online ahead of print.PMID: 40024314
  10. Gupta P, Khadake RM, Singh ON, Mirgane HA, Gupta D, Bhosale SV, Vrati S, Surjit M, Rode AB.    
    Targeting Two-Tetrad RNA G-Quadruplex in the SARS-CoV-2 RNA Genome Using Tetraphenylethene Derivatives for Antiviral Therapy.ACS Infect Dis. 2025 Feb 27. doi: 10.1021/acsinfecdis.5c00058. Online ahead of print.
    PMID: 40017008
  11. Agrawal R, Agarwal H, Mukherjee C, Chakraborty B, Sharma V, Tripathi V, Kumar N, Priya S, Gupta N, Jhingan GD, Bajaj A, Sengupta S. Nucleic Acids Res. 2025 Feb 8;53(4):gkaf106. doi: 10.1093/nar/gkaf106. PMID: 39997217
  12. Khadke RM, Arora V, Gupta P, Rode AB Harnessing Synthetic Riboswitches for Tunable Gene Regulation in Mammalian Cells.Chembiochem. 2025 Feb 24:e202401015. doi: 10.1002/cbic.202401015. Online ahead of print. PMID: 39995098
  13. Nirwal S, Jha R, Narayanan N, Sharma M, Kulkarni DS, Sharma D, Babu AS, Suthar DK, Rao DN, Nair DT The structure of the MutL-CTD:processivity-clamp complex provides insight regarding strand discrimination in non-methyl-directed DNA mismatch repair.Nucleic Acids Res. 2025 Feb 8;53(4):gkaf094. doi: 10.1093/nar/gkaf094. PMID: 39988319
  14. Rana K, Yadav P, Chakraborty R, Jha SK, Agrawal U, Bajaj A Engineered Nanomicelles Delivering the Combination of Steroids and Antioxidants Can Mitigate Local and Systemic Inflammation, Including Sepsis.Nanoscale Adv. 2025 Feb 4. doi: 10.1039/d4na00715h. Online ahead of print. PMID: 39967859
  15. Kumari S, Biswas A, Maiti TK, Bandyopadhyay B, Banerjee A Induction of PD-1 and CD44 in CD4+ T cells by circulatory extracellular vesicles from severe dengue patients drives endothelial damage via the NF-kB signaling pathway. J Virol. 2025 Feb 25;99(2):e0186124. doi: 10.1128/jvi.01861-24. Epub 2024 Dec 31. PMID: 39745465
  16. Mehta D, Dua C, Chakraborty R, Yadav P, Dasgupta U, Bajaj A. Docetaxel-conjugated bile acid-derived nanomicelles can inhibit tumour progression with reduced toxicity.Nanoscale Adv. 2025 Feb 4. doi: 10.1039/d4na00715h. Online ahead of print. PMID: 39967859
  17. Sheenu, Jain D. Transcription Regulation of Flagellins: A Structural Perspective.Biochemistry. 2025 Feb 18;64(4):770-781. doi: 10.1021/acs.biochem.4c00791. Epub 2025 Jan 28. PMID: 39874281
  18. Soni R, Soni N, Paul A, Tripathi A, Chatterjee S, Banerjee A.Integrated proteomics and connectivity map-based analysis reveal compounds with a potential antiviral effect against Japanese encephalitis virus infection in a mouse model.FEBS J. 2025 Feb;292(4):864-880. doi: 10.1111/febs.17370. Epub 2024 Dec 22. PMID: 39710957
  19. Kumar V, Meidinna HN, Kaul SC, Gupta D, Ishida Y, Terao K, Vrati S, Sundar D, Wadhwa R. Molecular insights to the anti-COVID-19 potential of α-, β- and γ-cyclodextrins.J Biomol Struct Dyn. 2025 Apr;43(6):2890-2900. doi: 10.1080/07391102.2023.2294385. Epub 2023 Dec 20. PMID: 38116950
  20. Rana K, Yadav P, Chakraborty R, Jha SK, Agrawal U, Bajaj A. Engineered Nanomicelles Delivering the Combination of Steroids and Antioxidants Can Mitigate Local and Systemic Inflammation, Including Sepsis.ACS Appl Mater Interfaces. 2025 Feb 13. doi: 10.1021/acsami.4c14159. Online ahead of print. PMID: 39946544
  21. Amita H, Subair Z, Mora T, Dudhe PE, Dhanasekaran K. Betrayal From the Core: Centriolar and Cytoskeletal Subversion by Infectious Pathogens.Cytoskeleton (Hoboken). 2025 Feb 4. doi: 10.1002/cm.22004. Online ahead of print. PMID: 39902598
  22. Kharbanda N, Biswas A, Tiwari A, Tailor P, Saha S, Wadhwa N, Thiruvengadam R, Salunke DM, Bhatnagar S, Garbh-Ini Study Group, Kshetrapal P, Maiti TK.Placental Proteomics Reveals an Elevated Level of Aldo-Keto Reductase 1-B1, Highlighting Its Potential Role in Spontaneous Preterm Birth.J Proteome Res. 2025 Feb 7;24(2):612-623. doi: 10.1021/acs.jproteome.4c00698. Epub 2025 Jan 6. PMID: 39762117
  23. Bhujel M, Kaloniya S, Jain D, Sripada L, Bajaj A, Rao GN. Amide Derivative of Arjunolic Acid TA-1,4-BiP Enhances ROSmediated Apoptosis in Colorectal Cancer Cells.Curr Med Chem. 2025 Jan 27. doi: 10.2174/0109298673348718250109142630. Online ahead of print. PMID: 39871569
  24. Goswami Y, Baghel A, Sharma G, Sharma PK, Biswas S, Yadav R, Garg PK, Shalimar, Tandon R. Liver Organoids From Hepatocytes of Healthy Humans and Non-alcoholic Fatty Liver Disease (NAFLD) Patients Display Multilineage Architecture and can be Used to Develop an In Vitro Model of Steatohepatitis.J Clin Exp Hepatol. 2025 May-Jun;15(3):102463. doi: 10.1016/j.jceh.2024.102463. Epub 2024 Dec 3. PMID: 39872219
  25. Chaudhary JK, Danga AK, Kumari A, Bhardwaj A, Rath PC. Role of chemokines in aging and age-related diseases.Mech Ageing Dev. 2025 Feb;223:112009. doi: 10.1016/j.mad.2024.112009. Epub 2024 Dec 2. PMID: 39631472
  26. Biswas B, Asif S, Puria R, Thakur A. A Novel and Robust Method for Investigating Fungal Biofilm.Bio Protoc. 2025 Jan 5;15(1):e5146. doi: 10.21769/BioProtoc.5146. eCollection 2025 Jan 5. PMID: 39803325
  27. Trivedi A, Kushwaha T, Ishani, Vrati S, Gupta D, Kayampeta SR, Parvez MK, Inampudi KK, Appaiahgari MB, Sehgal D.Psoralidin acts as a dual protease inhibitor against PLpro and Mpro of SARS-CoV-2.FEBS J. 2025 Jan 2. doi: 10.1111/febs.17380. Online ahead of print. PMID: 39745898

  28. Sharma KB, Subramani C, Ganesh K, Sharma A, Basu B, Balyan S, Sharma G, Ka S, Deb A, Srivastava M, Chugh S, Sehrawat S, Bharadwaj K, Rout A, Sahoo PK, Saurav S, Motiani RK, Singh R, Jain D, Asthana S, Wadhwa R, Vrati S. Withaferin A inhibits Chikungunya virus nsP2 protease and shows antiviral activity in the cell culture and mouse model of virus infection.PLoS Pathog. 2024 Dec 30;20(12):e1012816. doi: 10.1371/journal.ppat.1012816. eCollection 2024 Dec. PMID: 39775571

     

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