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Recent Publications

  1. Gupta P, Khadake RM, Singh ON, Mirgane HA, Gupta D, Bhosale SV, Vrati S, Surjit M, Rode AB.    
    Targeting Two-Tetrad RNA G-Quadruplex in the SARS-CoV-2 RNA Genome Using Tetraphenylethene Derivatives for Antiviral Therapy.ACS Infect Dis. 2025 Feb 27. doi: 10.1021/acsinfecdis.5c00058. Online ahead of print.
    PMID: 40017008
  2. Agrawal R, Agarwal H, Mukherjee C, Chakraborty B, Sharma V, Tripathi V, Kumar N, Priya S, Gupta N, Jhingan GD, Bajaj A, Sengupta S. Nucleic Acids Res. 2025 Feb 8;53(4):gkaf106. doi: 10.1093/nar/gkaf106. PMID: 39997217
  3. Khadke RM, Arora V, Gupta P, Rode AB Harnessing Synthetic Riboswitches for Tunable Gene Regulation in Mammalian Cells.Chembiochem. 2025 Feb 24:e202401015. doi: 10.1002/cbic.202401015. Online ahead of print. PMID: 39995098
  4. Nirwal S, Jha R, Narayanan N, Sharma M, Kulkarni DS, Sharma D, Babu AS, Suthar DK, Rao DN, Nair DT The structure of the MutL-CTD:processivity-clamp complex provides insight regarding strand discrimination in non-methyl-directed DNA mismatch repair.Nucleic Acids Res. 2025 Feb 8;53(4):gkaf094. doi: 10.1093/nar/gkaf094. PMID: 39988319
  5. Rana K, Yadav P, Chakraborty R, Jha SK, Agrawal U, Bajaj A Engineered Nanomicelles Delivering the Combination of Steroids and Antioxidants Can Mitigate Local and Systemic Inflammation, Including Sepsis.Nanoscale Adv. 2025 Feb 4. doi: 10.1039/d4na00715h. Online ahead of print. PMID: 39967859
  6. Kumari S, Biswas A, Maiti TK, Bandyopadhyay B, Banerjee A Induction of PD-1 and CD44 in CD4+ T cells by circulatory extracellular vesicles from severe dengue patients drives endothelial damage via the NF-kB signaling pathway. J Virol. 2025 Feb 25;99(2):e0186124. doi: 10.1128/jvi.01861-24. Epub 2024 Dec 31. PMID: 39745465
  7. Mehta D, Dua C, Chakraborty R, Yadav P, Dasgupta U, Bajaj A. Docetaxel-conjugated bile acid-derived nanomicelles can inhibit tumour progression with reduced toxicity.Nanoscale Adv. 2025 Feb 4. doi: 10.1039/d4na00715h. Online ahead of print. PMID: 39967859
  8. Sheenu, Jain D. Transcription Regulation of Flagellins: A Structural Perspective.Biochemistry. 2025 Feb 18;64(4):770-781. doi: 10.1021/acs.biochem.4c00791. Epub 2025 Jan 28. PMID: 39874281
  9. Soni R, Soni N, Paul A, Tripathi A, Chatterjee S, Banerjee A.Integrated proteomics and connectivity map-based analysis reveal compounds with a potential antiviral effect against Japanese encephalitis virus infection in a mouse model.FEBS J. 2025 Feb;292(4):864-880. doi: 10.1111/febs.17370. Epub 2024 Dec 22. PMID: 39710957
  10. Kumar V, Meidinna HN, Kaul SC, Gupta D, Ishida Y, Terao K, Vrati S, Sundar D, Wadhwa R. Molecular insights to the anti-COVID-19 potential of α-, β- and γ-cyclodextrins.J Biomol Struct Dyn. 2025 Apr;43(6):2890-2900. doi: 10.1080/07391102.2023.2294385. Epub 2023 Dec 20. PMID: 38116950
  11. Nirwal S, Jha R, Narayanan N, Sharma M, Kulkarni DS, Sharma D, Babu AS, Suthar DK, Rao DN, Nair DT. (2025) The structure of the MutL-CTD:processivity-clamp complex provides insight regarding strand discrimination in non-methyl-directed DNA mismatch repair. Nucleic Acids Res. 2025 53(4). doi: 10.1093/nar/gkaf094.
  12. Rana K, Yadav P, Chakraborty R, Jha SK, Agrawal U, Bajaj A. Engineered Nanomicelles Delivering the Combination of Steroids and Antioxidants Can Mitigate Local and Systemic Inflammation, Including Sepsis.ACS Appl Mater Interfaces. 2025 Feb 13. doi: 10.1021/acsami.4c14159. Online ahead of print. PMID: 39946544
  13. Amita H, Subair Z, Mora T, Dudhe PE, Dhanasekaran K. Betrayal From the Core: Centriolar and Cytoskeletal Subversion by Infectious Pathogens.Cytoskeleton (Hoboken). 2025 Feb 4. doi: 10.1002/cm.22004. Online ahead of print. PMID: 39902598
  14. Kharbanda N, Biswas A, Tiwari A, Tailor P, Saha S, Wadhwa N, Thiruvengadam R, Salunke DM, Bhatnagar S, Garbh-Ini Study Group, Kshetrapal P, Maiti TK.Placental Proteomics Reveals an Elevated Level of Aldo-Keto Reductase 1-B1, Highlighting Its Potential Role in Spontaneous Preterm Birth.J Proteome Res. 2025 Feb 7;24(2):612-623. doi: 10.1021/acs.jproteome.4c00698. Epub 2025 Jan 6. PMID: 39762117
  15. Bhujel M, Kaloniya S, Jain D, Sripada L, Bajaj A, Rao GN. Amide Derivative of Arjunolic Acid TA-1,4-BiP Enhances ROSmediated Apoptosis in Colorectal Cancer Cells.Curr Med Chem. 2025 Jan 27. doi: 10.2174/0109298673348718250109142630. Online ahead of print. PMID: 39871569
  16. Goswami Y, Baghel A, Sharma G, Sharma PK, Biswas S, Yadav R, Garg PK, Shalimar, Tandon R. Liver Organoids From Hepatocytes of Healthy Humans and Non-alcoholic Fatty Liver Disease (NAFLD) Patients Display Multilineage Architecture and can be Used to Develop an In Vitro Model of Steatohepatitis.J Clin Exp Hepatol. 2025 May-Jun;15(3):102463. doi: 10.1016/j.jceh.2024.102463. Epub 2024 Dec 3. PMID: 39872219
  17. Sheenu, Jain D.Transcription Regulation of Flagellins: A Structural Perspective.Biochemistry. 2025 Jan 28. doi: 10.1021/acs.biochem.4c00791. Online ahead of print. PMID: 39874281
  18. Chaudhary JK, Danga AK, Kumari A, Bhardwaj A, Rath PC. Role of chemokines in aging and age-related diseases.Mech Ageing Dev. 2025 Feb;223:112009. doi: 10.1016/j.mad.2024.112009. Epub 2024 Dec 2. PMID: 39631472
  19. Biswas B, Asif S, Puria R, Thakur A. A Novel and Robust Method for Investigating Fungal Biofilm.Bio Protoc. 2025 Jan 5;15(1):e5146. doi: 10.21769/BioProtoc.5146. eCollection 2025 Jan 5. PMID: 39803325
  20. Trivedi A, Kushwaha T, Ishani, Vrati S, Gupta D, Kayampeta SR, Parvez MK, Inampudi KK, Appaiahgari MB, Sehgal D.Psoralidin acts as a dual protease inhibitor against PLpro and Mpro of SARS-CoV-2.FEBS J. 2025 Jan 2. doi: 10.1111/febs.17380. Online ahead of print. PMID: 39745898
  21. Kumari S, Biswas A, Maiti TK, Bandyopadhyay B, Banerjee A. Induction of PD-1 and CD44 in CD4+ T cells by circulatory extracellular vesicles from severe dengue patients drives endothelial damage via the NF-kB signaling pathway.FEBS J. 2025 Jan 2. J Virol. 2024 Dec 31:e0186124. doi: 10.1128/jvi.01861-24. Online ahead of print. PMID: 39745465
  22. Sharma KB, Subramani C, Ganesh K, Sharma A, Basu B, Balyan S, Sharma G, Ka S, Deb A, Srivastava M, Chugh S, Sehrawat S, Bharadwaj K, Rout A, Sahoo PK, Saurav S, Motiani RK, Singh R, Jain D, Asthana S, Wadhwa R, Vrati S. Withaferin A inhibits Chikungunya virus nsP2 protease and shows antiviral activity in the cell culture and mouse model of virus infection.PLoS Pathog. 2024 Dec 30;20(12):e1012816. doi: 10.1371/journal.ppat.1012816. eCollection 2024 Dec. PMID: 39775571
  23. Kharbanda N, Biswas A, Tiwari A, Tailor P, Saha S, Wadhwa N, Thiruvengadam R, Salunke DM, Bhatnagar S, Garbh-Ini Study Group, Kshetrapal P, Maiti TK. Placental Proteomics Reveals an Elevated Level of Aldo-Keto Reductase 1-B1, Highlighting Its Potential Role in Spontaneous Preterm Birth.J Proteome Res. 2025 Jan 6. doi: 10.1021/acs.jproteome.4c00698. Online ahead of print. PMID: 39762117

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