• Screen Reader Access
  • A+ A A -
  • A A
Dr. Arup Banerjee
Professor
  • M.Sc. (Biochemistry), University of Calcutta, Kolkata
  • Ph.D. (Life Sciences) 2007, Jadavpur University, Kolkata
  • Postdoc (2008-2010) at Saint Louis University, MO, USA
  • Research Scientist D (2011-Aug. 2018) at VIDRC, THSTI, Faridabad
arup[at]rcb[dot]res[dot]in

The research in our lab is broadly directed at understanding the immune pathogenic mechanisms of vector-borne diseases caused by dengue and the Japanese encephalitis virus (JEV). The immunopathogenic mechanisms that drive disease progression are ill-understood. Among the immune cells, neutrophils are the body's first line of defense against infection and display plasticity, with the ability to adapt themselves in different inflammatory scenarios.

Our recent studies showed that viral infection significantly impacts neutrophil biogenesis and phenotypes (J Leukocyte Biology, 2023a, b). However, there is a lack of in-depth knowledge of the phenotypic heterogeneity of immune cells that arise due to viral infection.

Also, how these phenotypic changes are related to cell fate decisions in imparting adverse disease outcomes is unclear. In our lab, we use the JEV and dengue virus as prototype models to study the impact of neutrophil phenotypes on infection and immunity.

We are also interested in developing suitable models (small animal model, cell line, 3D organoid model) to study host-pathogen interaction at the interface of identifying immune modulators and antivirals.

Our lab is also interested in using extracellular vesicles to understand disease biology and novel interventions in viral infection.

  • Received fellowship from ‘Viral Hepatitis Research Foundation of Japan’ in 2005 & 2011

Selected Publications

All Publications

  1. Kumari S, Bandyopadhyay B, Singh A, Aggarwal S, Yadav AK, Vikram NK, Guchhait P, Banerjee A. Extracellular vesicles recovered from plasma of severe dengue patients induce CD4+ T cell suppression through PD-L1/PD-1 interaction. mBio. 2023 Nov 20:e0182323. doi: 10.1128/mbio.01823-23. PMID: 37982662
  2. Rawat S, Kumar S, Duggal S, Banerjee A. Phenotypic alteration by dengue virus serotype-2 delays neutrophil apoptosis and stimulates the release of prosurvival secretome with immunomodulatory functions. J Leukoc Biol. 2023 Oct 27:qiad133. doi: 10.1093/jleuko/qiad133. PMID: 37890093
  3. Duggal S, Rawat S, Siddqui G, Vishwakarma P, Samal S, Banerjee A, Vrati S. Dengue Virus Infection In Mice Induces Bone Marrow Myeloid Cell Differentiation And Generates Ly6glow Immature Neutrophils With Modulated Functions. J Leukoc Biol. 2023 Aug 30:qiad099. doi: 10.1093/jleuko/qiad099. PMID: 37648666
  4. Saini J, Thapa U, Bandyopadhyay B, Vrati S, Banerjee A. Knockdown of NEAT1 restricts dengue virus replication by augmenting interferon alpha-inducible protein 27 via the RIG-I pathway. J Gen Virol. 2023 Jan;104(1). doi: 10.1099/jgv.0.001823. PMID: 36748518
  5. Soni N, Tripathi A, Mukherjee S, Gupta S, Mohanty S, Basu A, Banerjee A. Bone marrow-derived extracellular vesicles modulate the abundance of infiltrating immune cells in the brain and exert an antiviral effect against the Japanese Encephalitis virus. FASEB BioAdvances, 2022. doi: 10.1096/fba.2022-00071
  6. Barnwal A, Basu B, Tripathi A, Soni N, Mishra D, Banerjee A, Kumar R, Vrati S, Bhattacharyya J.SARS-CoV-2 Spike Protein-Activated Dendritic Cell-Derived Extracellular Vesicles Induce Antiviral Immunity in Mice. ACS Biomater Sci Eng. 2022 Dec 12;8(12):5338-5348. doi: 10.1021/acsbiomaterials.2c01094. PMID: 36445062
  7. Gupta S, Krishnakumar V, Soni N, Rao EP, Banerjee A, Mohanty S. Comparative proteomic profiling of Small Extracellular vesicles derived from iPSCs and tissue specific mesenchymal stem cells. Exp Cell Res. 2022 Nov 15;420(2):113354. doi: 10.1016/j.yexcr.2022.113354.PMID: 36126717
  8. Sarkar L, Oko L, Gupta S, Bubak AN, Das B, Gupta P, Safiriyu AA, Singhal C, Neogi U, Bloom D, Banerjee A, Mahalingam R, Cohrs RJ, Koval M, Shindler KS, Pal D, Nagel M, Sarma JD. Azadirachta indica A. Juss bark extract and its Nimbin isomers restrict β-coronaviral infection and replication. Virology. 2022 Apr;569:13-28. doi: 10.1016/j.virol.2022.01.002.
  9. Soni N, Gupta S, Rawat S, Krishnakumar V, Mohanty S, Banerjee A. MicroRNA-Enriched Exosomes from Different Sources of Mesenchymal Stem Cells Can Differentially Modulate Functions of Immune Cells and Neurogenesis. Biomedicines 2021, 10(1) DOI: 10.3390/biomedicines10010069
  10. Gupta S; Vishal P; Sharma H; Soni N; Rao EP; Dalela M; Yadav A; Nautiyal N; Kumar A; Nayak B; Banerjee A; Dinda AK; Mohanty S. Comparative Evaluation of Anti-Fibrotic Effect of Tissue Specific Mesenchymal Stem Cells Derived Extracellular Vesicles for the Amelioration of CCl4 Induced Chronic Liver Injury. Stem Cell Rev Rep. 2021 Dec 2. doi: 10.1007/s12015-021-10313-9.
  11. Sharma KB, Chhabra S, Aggarwal S, Tripathi A, Banerjee A, Yadav AK, Vrati S, Kalia M. Proteomic landscape of Japanese encephalitis virus-infected fibroblasts. J Gen Virol. 2021 Sep;102(9). doi: 10.1099/jgv.0.001657. PMID: 34546869.
  12. Tripathi A, Banerjee A. Vrati S. Development and Characterization of a Robust Animal Model of Japanese Encephalitis Virus Infection in Adolescent C57BL/6 Mice. Dis Model Mech. 2021 Oct 1;14(10):dmm049176. doi: 10.1242/dmm.049176.
  13. Tripathi A, Shing B, Addya S, Surjit M, Kumar P, Vrati S, Banerjee A. Lack of Interferon 1 Regulatory Factor 8 Restricted IFN-gamma Response and Augmented Japanese Encephalitis Virus Replication in the Mouse Brain. J Virol. 2021 Oct 13;95(21):e0040621. doi:10.1128/JVI.00406-21.
  14. Rawat S, Vrati S, Banerjee A. Neutrophils at the crossroads of acute viral infections and severity. Mol Aspects Med. 2021. Oct;81:100996. doi: 10.1016/j.mam.2021.100996 PMID: 34284874
  15. Banerjee A, Tripathi A, Duggal S, Banerjee A, Vrati S. Dengue virus infection impedes megakaryopoiesis in MEG-01 cells where the virus envelope protein interacts with the transcription factor TAL-1. Sci Rep. 2020 Nov 11;10(1):19587. doi: 10.1038/s41598-020-76350-5.

Ph.D. students:

  • Ms. Bharti Kumari
    Title of thesis: Role of microRNAs in Japanese Encephalitis Virus Pathogenesis
    University: Jawaharlal Nehru University
    Year of award: 14th March 2019

  • Ms. Aarti Tripathi
    Current Affiliation: Department of Pathology, University of Texas Medical Branch, Galveston, TX 77555, USA
    Title of thesis: Exploring the Role of Interferon Regulatory Factor 8 (IRF-8) in mounting an innate immune response against Japanese Encephalitis virus
    University: Jawaharlal Nehru University
    Year of award: 18th November 2021

  • Ms. Jaya Saini
    Title of thesis: Role of lncRNA NEAT1 in the regulation of inflammatory response during Dengue Infection
    University: RCB, Faridabad
    Year of award: 19th May 2023
Dr. Arup Banerjee
Professor

Regional Centre for Biotechnology
NCR Biotech Science Cluster
3rd Milestone, Faridabad-Gurgaon Expressway
P.O. Box No. 3, Faridabad - 121 001
Haryana (NCR Delhi), India
E-mail: arup at rcb dot res dot in
Phone: 91 129-2848852

no text arup[at]rcb[dot]res[dot]in
no text 91 129-2848852

Dr. Arup Banerjee